Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfx3P48381 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfx3P48381 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfx3P48381 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.6□□□□□ -0.39
Rfx3P48381 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Gm11745-201ENSMUST00000121669 448 ntBASIC12.6□□□□□ -0.39
Rfx3P48381 Mir1895-201ENSMUST00000122615 79 ntBASIC12.6□□□□□ -0.39
Rfx3P48381 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Gm27397-201ENSMUST00000184997 107 ntBASIC12.6□□□□□ -0.39
Rfx3P48381 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Rfx3P48381 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.6□□□□□ -0.39
Rfx3P48381 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rfx3P48381 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfx3P48381 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rfx3P48381 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.59□□□□□ -0.39
Rfx3P48381 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gm25911-201ENSMUST00000157621 56 ntBASIC12.59□□□□□ -0.39
Rfx3P48381 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.59□□□□□ -0.39
Rfx3P48381 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.59□□□□□ -0.39
Rfx3P48381 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.59□□□□□ -0.39
Rfx3P48381 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.59□□□□□ -0.39
Rfx3P48381 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rfx3P48381 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Rfx3P48381 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rfx3P48381 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rfx3P48381 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.58□□□□□ -0.4
Rfx3P48381 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Rfx3P48381 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rfx3P48381 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rfx3P48381 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms