Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.02□□□□□ -0.97
Xcl1P47993 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.02□□□□□ -0.97
Xcl1P47993 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Xcl1P47993 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.02□□□□□ -0.97
Xcl1P47993 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Xcl1P47993 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Xcl1P47993 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.01□□□□□ -0.97
Xcl1P47993 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.01□□□□□ -0.97
Xcl1P47993 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC9.01□□□□□ -0.97
Xcl1P47993 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC9.01□□□□□ -0.97
Xcl1P47993 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC9.01□□□□□ -0.97
Xcl1P47993 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.01□□□□□ -0.97
Xcl1P47993 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 AV356131-201ENSMUST00000206201 750 ntBASIC9.01□□□□□ -0.97
Xcl1P47993 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Xcl1P47993 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Xcl1P47993 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Xcl1P47993 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Xcl1P47993 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Gm5939-201ENSMUST00000119613 2874 ntBASIC9□□□□□ -0.97
Xcl1P47993 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Xcl1P47993 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Xcl1P47993 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Xcl1P47993 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Xcl1P47993 Trav13-3-201ENSMUST00000117226 336 ntBASIC9□□□□□ -0.97
Xcl1P47993 Gm8318-201ENSMUST00000182954 872 ntBASIC9□□□□□ -0.97
Xcl1P47993 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Xcl1P47993 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms