Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm15678-201ENSMUST00000117573 960 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm44719-201ENSMUST00000206404 149 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm18307-201ENSMUST00000206864 949 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm18062-201ENSMUST00000208020 547 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm18055-201ENSMUST00000208254 547 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Nkx2-6P43688 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.18□□□□□ -0.3
Nkx2-6P43688 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Gm5035-201ENSMUST00000215581 927 ntBASIC13.17□□□□□ -0.3
Nkx2-6P43688 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.17□□□□□ -0.3
Nkx2-6P43688 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx2-6P43688 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx2-6P43688 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms