Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox18P43680 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox18P43680 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.39□□□□□ -0.27
Sox18P43680 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Sox18P43680 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox18P43680 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sox18P43680 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Sox18P43680 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Gm14201-201ENSMUST00000117627 289 ntBASIC13.38□□□□□ -0.27
Sox18P43680 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox18P43680 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Sox18P43680 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sox18P43680 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sox18P43680 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.38□□□□□ -0.27
Sox18P43680 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox18P43680 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox18P43680 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.37□□□□□ -0.27
Sox18P43680 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.37□□□□□ -0.27
Sox18P43680 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Mir5132-201ENSMUST00000175166 71 ntBASIC13.37□□□□□ -0.27
Sox18P43680 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Gm37714-201ENSMUST00000194742 342 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Gm19078-201ENSMUST00000206311 727 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.37□□□□□ -0.27
Sox18P43680 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Gm9823-201ENSMUST00000051212 327 ntBASIC13.37□□□□□ -0.27
Sox18P43680 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sox18P43680 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sox18P43680 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sox18P43680 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Sox18P43680 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Gm14667-201ENSMUST00000119448 1350 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.36□□□□□ -0.27
Sox18P43680 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.36□□□□□ -0.27
Sox18P43680 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sox18P43680 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms