Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Msh2P43247 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Msh2P43247 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Msh2P43247 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Msh2P43247 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.38□□□□□ -0.11
Msh2P43247 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.38□□□□□ -0.11
Msh2P43247 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.38□□□□□ -0.11
Msh2P43247 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.38□□□□□ -0.11
Msh2P43247 Gm45098-201ENSMUST00000207179 657 ntBASIC14.38□□□□□ -0.11
Msh2P43247 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msh2P43247 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.38□□□□□ -0.11
Msh2P43247 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.38□□□□□ -0.11
Msh2P43247 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
Msh2P43247 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh2P43247 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Msh2P43247 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh2P43247 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.37□□□□□ -0.11
Msh2P43247 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.37□□□□□ -0.11
Msh2P43247 Gm43474-201ENSMUST00000196415 774 ntBASIC14.37□□□□□ -0.11
Msh2P43247 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.37□□□□□ -0.11
Msh2P43247 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh2P43247 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Msh2P43247 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh2P43247 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msh2P43247 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh2P43247 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Msh2P43247 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Msh2P43247 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh2P43247 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Msh2P43247 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Msh2P43247 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh2P43247 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Msh2P43247 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh2P43247 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh2P43247 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms