Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cdx2P43241 Gm24447-201ENSMUST00000083977 338 ntBASIC13.19□□□□□ -0.3
Cdx2P43241 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.19□□□□□ -0.3
Cdx2P43241 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Cdx2P43241 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdx2P43241 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.18□□□□□ -0.3
Cdx2P43241 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.18□□□□□ -0.3
Cdx2P43241 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdx2P43241 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdx2P43241 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm29705-201ENSMUST00000212598 474 ntBASIC13.18□□□□□ -0.3
Cdx2P43241 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.18□□□□□ -0.3
Cdx2P43241 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.18□□□□□ -0.3
Cdx2P43241 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdx2P43241 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdx2P43241 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdx2P43241 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdx2P43241 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdx2P43241 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.17□□□□□ -0.3
Cdx2P43241 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.17□□□□□ -0.3
Cdx2P43241 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdx2P43241 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdx2P43241 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdx2P43241 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdx2P43241 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdx2P43241 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdx2P43241 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cdx2P43241 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.16□□□□□ -0.3
Cdx2P43241 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdx2P43241 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdx2P43241 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdx2P43241 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms