Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.48□□□□□ -0.09
HttP42859 Gm32025-201ENSMUST00000217960 307 ntBASIC14.48□□□□□ -0.09
HttP42859 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Gm25517-201ENSMUST00000083865 134 ntBASIC14.48□□□□□ -0.09
HttP42859 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
HttP42859 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
HttP42859 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.48□□□□□ -0.09
HttP42859 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.48□□□□□ -0.09
HttP42859 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HttP42859 Gm12403-201ENSMUST00000121384 959 ntBASIC14.48□□□□□ -0.09
HttP42859 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.48□□□□□ -0.09
HttP42859 Gm44405-201ENSMUST00000198952 126 ntBASIC14.48□□□□□ -0.09
HttP42859 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.48□□□□□ -0.09
HttP42859 Spcs1-203ENSMUST00000226374 592 ntBASIC14.48□□□□□ -0.09
HttP42859 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.48□□□□□ -0.09
HttP42859 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.48□□□□□ -0.09
HttP42859 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
HttP42859 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.48□□□□□ -0.09
HttP42859 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC14.48□□□□□ -0.09
HttP42859 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HttP42859 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HttP42859 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Gm38144-201ENSMUST00000192790 465 ntBASIC14.47□□□□□ -0.09
HttP42859 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.47□□□□□ -0.09
HttP42859 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.47□□□□□ -0.09
HttP42859 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Gm16372-201ENSMUST00000073088 450 ntBASIC14.47□□□□□ -0.09
HttP42859 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.47□□□□□ -0.09
HttP42859 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HttP42859 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.47□□□□□ -0.09
HttP42859 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.47□□□□□ -0.09
HttP42859 Gm8738-201ENSMUST00000172606 329 ntBASIC14.47□□□□□ -0.09
HttP42859 Gm7003-201ENSMUST00000195089 312 ntBASIC14.47□□□□□ -0.09
HttP42859 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HttP42859 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HttP42859 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.47□□□□□ -0.09
HttP42859 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HttP42859 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HttP42859 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.46□□□□□ -0.09
HttP42859 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.46□□□□□ -0.09
HttP42859 Gm5369-201ENSMUST00000217499 588 ntBASIC14.46□□□□□ -0.09
HttP42859 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HttP42859 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HttP42859 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HttP42859 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HttP42859 Gm13045-201ENSMUST00000119019 712 ntBASIC14.46□□□□□ -0.09
HttP42859 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.46□□□□□ -0.09
HttP42859 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HttP42859 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.46□□□□□ -0.09
HttP42859 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms