Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pbx1P41778 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.01□□□□□ -0.01
Pbx1P41778 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.01□□□□□ -0.01
Pbx1P41778 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pbx1P41778 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pbx1P41778 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pbx1P41778 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pbx1P41778 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15□□□□□ -0.01
Pbx1P41778 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pbx1P41778 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pbx1P41778 Gm5939-201ENSMUST00000119613 2874 ntBASIC15□□□□□ -0.01
Pbx1P41778 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15□□□□□ -0.01
Pbx1P41778 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15□□□□□ -0.01
Pbx1P41778 Gm27494-201ENSMUST00000184735 189 ntBASIC15□□□□□ -0.01
Pbx1P41778 Gm16476-201ENSMUST00000221544 139 ntBASIC15□□□□□ -0.01
Pbx1P41778 Dupd1-202ENSMUST00000224735 548 ntBASIC15□□□□□ -0.01
Pbx1P41778 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pbx1P41778 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Pbx1P41778 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pbx1P41778 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15□□□□□ -0.01
Pbx1P41778 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pbx1P41778 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pbx1P41778 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.99□□□□□ -0.01
Pbx1P41778 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.99□□□□□ -0.01
Pbx1P41778 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pbx1P41778 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.99□□□□□ -0.01
Pbx1P41778 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.99□□□□□ -0.01
Pbx1P41778 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Pbx1P41778 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.99□□□□□ -0.01
Pbx1P41778 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pbx1P41778 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pbx1P41778 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Pbx1P41778 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.98□□□□□ -0.01
Pbx1P41778 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.98□□□□□ -0.01
Pbx1P41778 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pbx1P41778 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pbx1P41778 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms