Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.34□□□□□ -0.59
Rab5cP35278 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Rab5cP35278 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Rab5cP35278 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.34□□□□□ -0.59
Rab5cP35278 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.34□□□□□ -0.59
Rab5cP35278 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.34□□□□□ -0.59
Rab5cP35278 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.34□□□□□ -0.59
Rab5cP35278 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rab5cP35278 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rab5cP35278 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.33□□□□□ -0.6
Rab5cP35278 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rab5cP35278 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm15165-201ENSMUST00000118140 502 ntBASIC11.33□□□□□ -0.6
Rab5cP35278 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm7889-201ENSMUST00000185591 958 ntBASIC11.33□□□□□ -0.6
Rab5cP35278 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rab5cP35278 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rab5cP35278 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.32□□□□□ -0.6
Rab5cP35278 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rab5cP35278 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rab5cP35278 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Gm15794-201ENSMUST00000120182 631 ntBASIC11.32□□□□□ -0.6
Rab5cP35278 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Rab5cP35278 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.32□□□□□ -0.6
Rab5cP35278 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.32□□□□□ -0.6
Rab5cP35278 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.32□□□□□ -0.6
Rab5cP35278 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rab5cP35278 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms