Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.28□□□□□ -0.12
Mmp13P33435 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.28□□□□□ -0.12
Mmp13P33435 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.28□□□□□ -0.12
Mmp13P33435 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Gm9824-201ENSMUST00000178707 561 ntBASIC14.28□□□□□ -0.12
Mmp13P33435 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Mmp13P33435 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.28□□□□□ -0.12
Mmp13P33435 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp13P33435 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp13P33435 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mmp13P33435 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Mmp13P33435 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Mmp13P33435 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.27□□□□□ -0.12
Mmp13P33435 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Mmp13P33435 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Mmp13P33435 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp13P33435 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Gm15920-201ENSMUST00000118998 402 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.27□□□□□ -0.13
Mmp13P33435 Gm25925-201ENSMUST00000158314 306 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 Mir6956-201ENSMUST00000183598 62 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 Gm27430-201ENSMUST00000184585 107 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 Gm44333-201ENSMUST00000197168 107 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.27□□□□□ -0.13
Mmp13P33435 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mmp13P33435 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Mmp13P33435 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp13P33435 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.26□□□□□ -0.13
Mmp13P33435 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.26□□□□□ -0.13
Mmp13P33435 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Mmp13P33435 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Gm44872-201ENSMUST00000207864 420 ntBASIC14.26□□□□□ -0.13
Mmp13P33435 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.26□□□□□ -0.13
Mmp13P33435 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.26□□□□□ -0.13
Mmp13P33435 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mmp13P33435 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp13P33435 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Mmp13P33435 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms