Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12□□□□□ -0.49
Slc6a1P31648 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12□□□□□ -0.49
Slc6a1P31648 Gm27646-201ENSMUST00000183989 110 ntBASIC12□□□□□ -0.49
Slc6a1P31648 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12□□□□□ -0.49
Slc6a1P31648 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 AC154222.1-201ENSMUST00000223882 475 ntBASIC12□□□□□ -0.49
Slc6a1P31648 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12□□□□□ -0.49
Slc6a1P31648 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Gm11873-201ENSMUST00000117877 1304 ntBASIC12□□□□□ -0.49
Slc6a1P31648 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12□□□□□ -0.49
Slc6a1P31648 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12□□□□□ -0.49
Slc6a1P31648 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12□□□□□ -0.49
Slc6a1P31648 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Slc6a1P31648 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 Gm28386-201ENSMUST00000189147 1849 ntBASIC12□□□□□ -0.49
Slc6a1P31648 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Slc6a1P31648 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Gm13464-201ENSMUST00000119418 935 ntBASIC11.99□□□□□ -0.49
Slc6a1P31648 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Gm18489-201ENSMUST00000172565 551 ntBASIC11.99□□□□□ -0.49
Slc6a1P31648 Gm27525-201ENSMUST00000184465 107 ntBASIC11.99□□□□□ -0.49
Slc6a1P31648 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.99□□□□□ -0.49
Slc6a1P31648 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc6a1P31648 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.98□□□□□ -0.49
Slc6a1P31648 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a1P31648 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc6a1P31648 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc6a1P31648 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms