Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nfkb1P25799 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nfkb1P25799 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.31□□□□□ -0.12
Nfkb1P25799 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Gm15678-201ENSMUST00000117573 960 ntBASIC14.31□□□□□ -0.12
Nfkb1P25799 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Gm18905-201ENSMUST00000205454 928 ntBASIC14.31□□□□□ -0.12
Nfkb1P25799 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Nfkb1P25799 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nfkb1P25799 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.31□□□□□ -0.12
Nfkb1P25799 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nfkb1P25799 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nfkb1P25799 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Nfkb1P25799 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.3□□□□□ -0.12
Nfkb1P25799 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Gm13385-201ENSMUST00000121089 220 ntBASIC14.3□□□□□ -0.12
Nfkb1P25799 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.3□□□□□ -0.12
Nfkb1P25799 Gm18187-201ENSMUST00000196476 984 ntBASIC14.3□□□□□ -0.12
Nfkb1P25799 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.3□□□□□ -0.12
Nfkb1P25799 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.3□□□□□ -0.12
Nfkb1P25799 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nfkb1P25799 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.3□□□□□ -0.12
Nfkb1P25799 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nfkb1P25799 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Gm14127-201ENSMUST00000117906 678 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Nfkb1P25799 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nfkb1P25799 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.29□□□□□ -0.12
Nfkb1P25799 Gm8927-201ENSMUST00000181978 981 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms