Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
BdnfP21237 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.38□□□□□ -0.27
BdnfP21237 Gm15467-201ENSMUST00000120582 445 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Gm27525-201ENSMUST00000184465 107 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Gm44771-201ENSMUST00000206975 626 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.38□□□□□ -0.27
BdnfP21237 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
BdnfP21237 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BdnfP21237 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
BdnfP21237 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.37□□□□□ -0.27
BdnfP21237 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.37□□□□□ -0.27
BdnfP21237 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.37□□□□□ -0.27
BdnfP21237 Gm11025-201ENSMUST00000140773 466 ntBASIC13.37□□□□□ -0.27
BdnfP21237 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.37□□□□□ -0.27
BdnfP21237 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.37□□□□□ -0.27
BdnfP21237 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.37□□□□□ -0.27
BdnfP21237 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BdnfP21237 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
BdnfP21237 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.36□□□□□ -0.27
BdnfP21237 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
BdnfP21237 Gm11543-201ENSMUST00000120758 370 ntBASIC13.36□□□□□ -0.27
BdnfP21237 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.36□□□□□ -0.27
BdnfP21237 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.36□□□□□ -0.27
BdnfP21237 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.36□□□□□ -0.27
BdnfP21237 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms