Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf9P20334 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm24694-201ENSMUST00000180054 110 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm27663-201ENSMUST00000184839 110 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf9P20334 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Mir6420-201ENSMUST00000185032 102 ntBASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tnfrsf9P20334 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms