Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Kcna1P16388 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Kcna1P16388 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Gm14928-201ENSMUST00000120198 477 ntBASIC15.8■□□□□ 0.12
Kcna1P16388 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.8■□□□□ 0.12
Kcna1P16388 Gm18905-201ENSMUST00000205454 928 ntBASIC15.8■□□□□ 0.12
Kcna1P16388 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.8■□□□□ 0.12
Kcna1P16388 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Kcna1P16388 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Kcna1P16388 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcna1P16388 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Kcna1P16388 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcna1P16388 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.79■□□□□ 0.12
Kcna1P16388 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.79■□□□□ 0.12
Kcna1P16388 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.79■□□□□ 0.12
Kcna1P16388 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
Kcna1P16388 Gm5425-201ENSMUST00000214125 459 ntBASIC15.79■□□□□ 0.12
Kcna1P16388 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Kcna1P16388 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
Kcna1P16388 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Kcna1P16388 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Kcna1P16388 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Kcna1P16388 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Kcna1P16388 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.78■□□□□ 0.12
Kcna1P16388 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Kcna1P16388 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.78■□□□□ 0.12
Kcna1P16388 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.78■□□□□ 0.12
Kcna1P16388 Mir698-201ENSMUST00000102164 109 ntBASIC15.78■□□□□ 0.12
Kcna1P16388 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Kcna1P16388 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Kcna1P16388 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Kcna1P16388 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Kcna1P16388 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.78■□□□□ 0.12
Kcna1P16388 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Kcna1P16388 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Kcna1P16388 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Kcna1P16388 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Kcna1P16388 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.77■□□□□ 0.12
Kcna1P16388 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Kcna1P16388 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Kcna1P16388 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.77■□□□□ 0.12
Kcna1P16388 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.77■□□□□ 0.12
Kcna1P16388 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms