Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Srp54P14576 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.71□□□□□ -0.21
Srp54P14576 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.71□□□□□ -0.21
Srp54P14576 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.71□□□□□ -0.21
Srp54P14576 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.71□□□□□ -0.21
Srp54P14576 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.71□□□□□ -0.21
Srp54P14576 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.71□□□□□ -0.21
Srp54P14576 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Srp54P14576 Gm5425-201ENSMUST00000214125 459 ntBASIC13.71□□□□□ -0.21
Srp54P14576 Gm18027-201ENSMUST00000218947 619 ntBASIC13.71□□□□□ -0.21
Srp54P14576 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.71□□□□□ -0.21
Srp54P14576 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Srp54P14576 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srp54P14576 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Srp54P14576 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Srp54P14576 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srp54P14576 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
Srp54P14576 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Srp54P14576 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.7□□□□□ -0.22
Srp54P14576 Gm18624-201ENSMUST00000220966 658 ntBASIC13.7□□□□□ -0.22
Srp54P14576 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Srp54P14576 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Srp54P14576 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Srp54P14576 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.7□□□□□ -0.22
Srp54P14576 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Srp54P14576 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Srp54P14576 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srp54P14576 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.69□□□□□ -0.22
Srp54P14576 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Srp54P14576 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Srp54P14576 Mir6392-201ENSMUST00000184924 108 ntBASIC13.69□□□□□ -0.22
Srp54P14576 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.69□□□□□ -0.22
Srp54P14576 Gm17795-201ENSMUST00000214505 757 ntBASIC13.69□□□□□ -0.22
Srp54P14576 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.69□□□□□ -0.22
Srp54P14576 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Srp54P14576 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srp54P14576 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms