Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.26□□□□□ -0.45
Ccl3P10855 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl3P10855 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl3P10855 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccl3P10855 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl3P10855 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Ccl3P10855 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccl3P10855 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm27331-201ENSMUST00000183705 60 ntBASIC12.25□□□□□ -0.45
Ccl3P10855 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm29705-201ENSMUST00000212598 474 ntBASIC12.25□□□□□ -0.45
Ccl3P10855 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccl3P10855 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.25□□□□□ -0.45
Ccl3P10855 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccl3P10855 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl3P10855 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.24□□□□□ -0.45
Ccl3P10855 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Gm8213-201ENSMUST00000118191 441 ntBASIC12.24□□□□□ -0.45
Ccl3P10855 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.24□□□□□ -0.45
Ccl3P10855 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Gm18054-201ENSMUST00000207539 555 ntBASIC12.24□□□□□ -0.45
Ccl3P10855 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccl3P10855 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl3P10855 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl3P10855 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl3P10855 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms