Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rc3h2P0C090 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.17□□□□□ -0.14
Rc3h2P0C090 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Gm5035-201ENSMUST00000215581 927 ntBASIC14.17□□□□□ -0.14
Rc3h2P0C090 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.17□□□□□ -0.14
Rc3h2P0C090 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Mir497b-201ENSMUST00000093601 125 ntBASIC14.17□□□□□ -0.14
Rc3h2P0C090 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rc3h2P0C090 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rc3h2P0C090 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Gm11524-201ENSMUST00000119349 807 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Gm17150-201ENSMUST00000165577 381 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.16□□□□□ -0.14
Rc3h2P0C090 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rc3h2P0C090 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.15□□□□□ -0.14
Rc3h2P0C090 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.15□□□□□ -0.14
Rc3h2P0C090 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rc3h2P0C090 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms