Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC20.65■□□□□ 0.9
NclP09405 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NclP09405 Gm42471-201ENSMUST00000201457 1865 ntBASIC20.64■□□□□ 0.9
NclP09405 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NclP09405 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
NclP09405 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
NclP09405 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.64■□□□□ 0.89
NclP09405 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.64■□□□□ 0.89
NclP09405 CT030657.3-201ENSMUST00000222707 1200 ntBASIC20.64■□□□□ 0.89
NclP09405 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.64■□□□□ 0.89
NclP09405 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NclP09405 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC20.64■□□□□ 0.89
NclP09405 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NclP09405 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NclP09405 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NclP09405 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.64■□□□□ 0.89
NclP09405 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NclP09405 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NclP09405 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC20.63■□□□□ 0.89
NclP09405 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC20.63■□□□□ 0.89
NclP09405 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.63■□□□□ 0.89
NclP09405 Gm8602-201ENSMUST00000184045 607 ntBASIC20.63■□□□□ 0.89
NclP09405 Gm19078-201ENSMUST00000206311 727 ntBASIC20.63■□□□□ 0.89
NclP09405 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC20.63■□□□□ 0.89
NclP09405 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.63■□□□□ 0.89
NclP09405 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NclP09405 Mir497b-201ENSMUST00000093601 125 ntBASIC20.63■□□□□ 0.89
NclP09405 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.63■□□□□ 0.89
NclP09405 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
NclP09405 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC20.63■□□□□ 0.89
NclP09405 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 AC126549.2-201ENSMUST00000223997 1976 ntBASIC20.63■□□□□ 0.89
NclP09405 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NclP09405 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NclP09405 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NclP09405 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.62■□□□□ 0.89
NclP09405 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NclP09405 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NclP09405 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms