Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm18052-201ENSMUST00000208750 559 ntBASIC12.73□□□□□ -0.37
Col4a2P08122 Cts7-204ENSMUST00000225321 1257 ntBASIC12.73□□□□□ -0.37
Col4a2P08122 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Col4a2P08122 Gm24526-201ENSMUST00000082921 158 ntBASIC12.73□□□□□ -0.37
Col4a2P08122 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Col4a2P08122 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col4a2P08122 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.73□□□□□ -0.37
Col4a2P08122 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col4a2P08122 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Col4a2P08122 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col4a2P08122 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col4a2P08122 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col4a2P08122 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col4a2P08122 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Gm13342-201ENSMUST00000121055 207 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Gm13786-201ENSMUST00000122371 333 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Gm26461-201ENSMUST00000175064 290 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Mir3547-201ENSMUST00000175461 88 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Gm37008-201ENSMUST00000195712 319 ntBASIC12.72□□□□□ -0.37
Col4a2P08122 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.72□□□□□ -0.37
Col4a2P08122 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Col4a2P08122 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col4a2P08122 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Col4a2P08122 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col4a2P08122 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col4a2P08122 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col4a2P08122 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a2P08122 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Gm6023-201ENSMUST00000118217 606 ntBASIC12.71□□□□□ -0.37
Col4a2P08122 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.71□□□□□ -0.37
Col4a2P08122 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.71□□□□□ -0.37
Col4a2P08122 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a2P08122 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.71□□□□□ -0.37
Col4a2P08122 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.71□□□□□ -0.37
Col4a2P08122 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Col4a2P08122 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col4a2P08122 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.71□□□□□ -0.37
Col4a2P08122 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a2P08122 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.71□□□□□ -0.37
Col4a2P08122 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.71□□□□□ -0.37
Col4a2P08122 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col4a2P08122 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col4a2P08122 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a2P08122 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms