Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.3□□□□□ -0.6
P04940 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Gm13385-201ENSMUST00000121089 220 ntBASIC11.3□□□□□ -0.6
P04940 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
P04940 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
P04940 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04940 Gm17837-201ENSMUST00000186435 985 ntBASIC11.3□□□□□ -0.6
P04940 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.3□□□□□ -0.6
P04940 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.3□□□□□ -0.6
P04940 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.3□□□□□ -0.6
P04940 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.3□□□□□ -0.6
P04940 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
P04940 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.3□□□□□ -0.6
P04940 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
P04940 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04940 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04940 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gm6912-201ENSMUST00000117218 544 ntBASIC11.29□□□□□ -0.6
P04940 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.29□□□□□ -0.6
P04940 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
P04940 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.29□□□□□ -0.6
P04940 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.29□□□□□ -0.6
P04940 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.29□□□□□ -0.6
P04940 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gm8927-201ENSMUST00000181978 981 ntBASIC11.29□□□□□ -0.6
P04940 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.29□□□□□ -0.6
P04940 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04940 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P04940 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gm3222-201ENSMUST00000071282 990 ntBASIC11.29□□□□□ -0.6
P04940 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.29□□□□□ -0.6
P04940 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.29□□□□□ -0.6
P04940 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P04940 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
P04940 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P04940 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.28□□□□□ -0.6
P04940 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P04940 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
P04940 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
P04940 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.28□□□□□ -0.6
P04940 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.28□□□□□ -0.6
P04940 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P04940 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.28□□□□□ -0.6
P04940 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms