Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Hoxa3P02831 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.71□□□□□ -0.53
Hoxa3P02831 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Hoxa3P02831 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hoxa3P02831 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.71□□□□□ -0.54
Hoxa3P02831 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.71□□□□□ -0.54
Hoxa3P02831 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Hoxa3P02831 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Hoxa3P02831 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm12859-201ENSMUST00000117834 427 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm14042-201ENSMUST00000120139 833 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm11424-201ENSMUST00000121929 829 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm21854-201ENSMUST00000179901 471 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.7□□□□□ -0.54
Hoxa3P02831 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.7□□□□□ -0.54
Hoxa3P02831 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Hoxa3P02831 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm42612-201ENSMUST00000197986 623 ntBASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm43170-201ENSMUST00000199827 612 ntBASIC11.69□□□□□ -0.54
Hoxa3P02831 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.69□□□□□ -0.54
Hoxa3P02831 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hoxa3P02831 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms