Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
TcraP01849 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
TcraP01849 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.17□□□□□ -0.78
TcraP01849 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
TcraP01849 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.17□□□□□ -0.78
TcraP01849 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.17□□□□□ -0.78
TcraP01849 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Gm9103-201ENSMUST00000119371 405 ntBASIC10.17□□□□□ -0.78
TcraP01849 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
TcraP01849 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Gm6296-201ENSMUST00000222599 943 ntBASIC10.17□□□□□ -0.78
TcraP01849 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.17□□□□□ -0.78
TcraP01849 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.17□□□□□ -0.78
TcraP01849 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
TcraP01849 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TcraP01849 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
TcraP01849 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.16□□□□□ -0.78
TcraP01849 Gm14042-201ENSMUST00000120139 833 ntBASIC10.16□□□□□ -0.78
TcraP01849 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Gm27646-201ENSMUST00000183989 110 ntBASIC10.16□□□□□ -0.78
TcraP01849 Gm28033-201ENSMUST00000184224 96 ntBASIC10.16□□□□□ -0.78
TcraP01849 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.16□□□□□ -0.78
TcraP01849 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.16□□□□□ -0.78
TcraP01849 AC151836.1-202ENSMUST00000226259 753 ntBASIC10.16□□□□□ -0.78
TcraP01849 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
TcraP01849 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.16□□□□□ -0.78
TcraP01849 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.16□□□□□ -0.78
TcraP01849 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
TcraP01849 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TcraP01849 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
TcraP01849 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms