Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01643 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01643 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
P01643 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.05□□□□□ -0.64
P01643 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.05□□□□□ -0.64
P01643 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.05□□□□□ -0.64
P01643 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01643 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Gm29741-201ENSMUST00000192667 421 ntBASIC11.05□□□□□ -0.64
P01643 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.05□□□□□ -0.64
P01643 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P01643 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.05□□□□□ -0.64
P01643 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.05□□□□□ -0.64
P01643 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P01643 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
P01643 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
P01643 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P01643 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
P01643 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.04□□□□□ -0.64
P01643 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01643 Gm11524-201ENSMUST00000119349 807 ntBASIC11.04□□□□□ -0.64
P01643 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.04□□□□□ -0.64
P01643 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.04□□□□□ -0.64
P01643 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.04□□□□□ -0.64
P01643 Gm19078-201ENSMUST00000206311 727 ntBASIC11.04□□□□□ -0.64
P01643 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01643 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P01643 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.04□□□□□ -0.64
P01643 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01643 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P01643 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P01643 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
P01643 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
P01643 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P01643 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms