Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.04■□□□□ -0
Vti1aO89116 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.04■□□□□ -0
Vti1aO89116 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.04■□□□□ -0
Vti1aO89116 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vti1aO89116 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vti1aO89116 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vti1aO89116 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vti1aO89116 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vti1aO89116 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.03■□□□□ -0
Vti1aO89116 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.03■□□□□ -0
Vti1aO89116 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.03■□□□□ -0
Vti1aO89116 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vti1aO89116 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Vti1aO89116 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vti1aO89116 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.03■□□□□ -0
Vti1aO89116 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.02■□□□□ -0
Vti1aO89116 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.02■□□□□ -0
Vti1aO89116 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vti1aO89116 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.02■□□□□ -0
Vti1aO89116 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vti1aO89116 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.02■□□□□ -0
Vti1aO89116 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.02■□□□□ -0
Vti1aO89116 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vti1aO89116 Gm10275-202ENSMUST00000168697 495 ntBASIC15.02■□□□□ -0
Vti1aO89116 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.02■□□□□ -0
Vti1aO89116 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.02■□□□□ -0
Vti1aO89116 Gm10275-201ENSMUST00000092620 635 ntBASIC15.02■□□□□ -0
Vti1aO89116 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vti1aO89116 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.02□□□□□ -0.01
Vti1aO89116 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vti1aO89116 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vti1aO89116 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vti1aO89116 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.01□□□□□ -0.01
Vti1aO89116 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vti1aO89116 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vti1aO89116 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vti1aO89116 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.01□□□□□ -0.01
Vti1aO89116 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.01□□□□□ -0.01
Vti1aO89116 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Vti1aO89116 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.01□□□□□ -0.01
Vti1aO89116 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.01□□□□□ -0.01
Vti1aO89116 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.01□□□□□ -0.01
Vti1aO89116 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.01□□□□□ -0.01
Vti1aO89116 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms