Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Syn1O88935 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Gm15957-201ENSMUST00000118893 974 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Gm11793-201ENSMUST00000120433 981 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.31□□□□□ -0.12
Syn1O88935 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.31□□□□□ -0.12
Syn1O88935 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syn1O88935 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Gm43133-201ENSMUST00000197472 463 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Rps4l-202ENSMUST00000204242 789 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.31□□□□□ -0.12
Syn1O88935 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.31□□□□□ -0.12
Syn1O88935 Gm8598-201ENSMUST00000221184 836 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syn1O88935 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.31□□□□□ -0.12
Syn1O88935 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Syn1O88935 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Syn1O88935 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Syn1O88935 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Syn1O88935 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Syn1O88935 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.3□□□□□ -0.12
Syn1O88935 Gm12485-201ENSMUST00000119641 291 ntBASIC14.3□□□□□ -0.12
Syn1O88935 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.3□□□□□ -0.12
Syn1O88935 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Gm27682-201ENSMUST00000183930 110 ntBASIC14.3□□□□□ -0.12
Syn1O88935 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.3□□□□□ -0.12
Syn1O88935 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.3□□□□□ -0.12
Syn1O88935 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Syn1O88935 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syn1O88935 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.29□□□□□ -0.12
Syn1O88935 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.29□□□□□ -0.12
Syn1O88935 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.29□□□□□ -0.12
Syn1O88935 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Gm17376-201ENSMUST00000166016 84 ntBASIC14.29□□□□□ -0.12
Syn1O88935 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Gm10608-202ENSMUST00000213924 676 ntBASIC14.29□□□□□ -0.12
Syn1O88935 Gm6082-201ENSMUST00000215204 454 ntBASIC14.29□□□□□ -0.12
Syn1O88935 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Syn1O88935 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.29□□□□□ -0.12
Syn1O88935 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Syn1O88935 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms