Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Hcn1O88704 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hcn1O88704 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hcn1O88704 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hcn1O88704 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Gm6415-201ENSMUST00000118488 348 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Hcn1O88704 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Gm25925-201ENSMUST00000158314 306 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.38□□□□□ -0.27
Hcn1O88704 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hcn1O88704 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Hcn1O88704 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hcn1O88704 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.37□□□□□ -0.27
Hcn1O88704 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Hcn1O88704 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Gm18766-201ENSMUST00000189811 808 ntBASIC13.37□□□□□ -0.27
Hcn1O88704 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hcn1O88704 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hcn1O88704 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Hcn1O88704 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcn1O88704 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Grk6-205ENSMUST00000224653 2976 ntBASIC13.36□□□□□ -0.27
Hcn1O88704 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcn1O88704 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hcn1O88704 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms