Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.89■□□□□ 0.45
Nid2O88322 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nid2O88322 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nid2O88322 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nid2O88322 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.88■□□□□ 0.45
Nid2O88322 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nid2O88322 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.88■□□□□ 0.45
Nid2O88322 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.88■□□□□ 0.45
Nid2O88322 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nid2O88322 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nid2O88322 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.88■□□□□ 0.45
Nid2O88322 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Gm20482-202ENSMUST00000174729 825 ntBASIC17.88■□□□□ 0.45
Nid2O88322 Mir5132-201ENSMUST00000175166 71 ntBASIC17.88■□□□□ 0.45
Nid2O88322 Gm18753-201ENSMUST00000201000 566 ntBASIC17.88■□□□□ 0.45
Nid2O88322 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.88■□□□□ 0.45
Nid2O88322 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nid2O88322 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nid2O88322 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.87■□□□□ 0.45
Nid2O88322 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.87■□□□□ 0.45
Nid2O88322 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.87■□□□□ 0.45
Nid2O88322 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.87■□□□□ 0.45
Nid2O88322 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.87■□□□□ 0.45
Nid2O88322 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nid2O88322 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nid2O88322 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.87■□□□□ 0.45
Nid2O88322 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nid2O88322 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nid2O88322 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
Nid2O88322 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Nid2O88322 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.86■□□□□ 0.45
Nid2O88322 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC17.86■□□□□ 0.45
Nid2O88322 Gm12997-201ENSMUST00000120207 640 ntBASIC17.86■□□□□ 0.45
Nid2O88322 Gm16479-201ENSMUST00000121706 932 ntBASIC17.86■□□□□ 0.45
Nid2O88322 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.86■□□□□ 0.45
Nid2O88322 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.86■□□□□ 0.45
Nid2O88322 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.86■□□□□ 0.45
Nid2O88322 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nid2O88322 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.86■□□□□ 0.45
Nid2O88322 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nid2O88322 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nid2O88322 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nid2O88322 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nid2O88322 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nid2O88322 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nid2O88322 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.85■□□□□ 0.45
Nid2O88322 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms