Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pdlim1O70400 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pdlim1O70400 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Pdlim1O70400 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Pdlim1O70400 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pdlim1O70400 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Pdlim1O70400 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.77□□□□□ -0.21
Pdlim1O70400 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Gm15321-201ENSMUST00000121290 288 ntBASIC13.77□□□□□ -0.21
Pdlim1O70400 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim1O70400 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.77□□□□□ -0.21
Pdlim1O70400 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.77□□□□□ -0.21
Pdlim1O70400 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.77□□□□□ -0.21
Pdlim1O70400 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Mir497b-201ENSMUST00000093601 125 ntBASIC13.77□□□□□ -0.21
Pdlim1O70400 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim1O70400 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pdlim1O70400 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pdlim1O70400 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.76□□□□□ -0.21
Pdlim1O70400 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.76□□□□□ -0.21
Pdlim1O70400 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.76□□□□□ -0.21
Pdlim1O70400 Gm18905-201ENSMUST00000205454 928 ntBASIC13.76□□□□□ -0.21
Pdlim1O70400 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pdlim1O70400 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pdlim1O70400 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pdlim1O70400 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pdlim1O70400 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.75□□□□□ -0.21
Pdlim1O70400 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms