Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcnu1O54982 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcnu1O54982 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.86□□□□□ -0.03
Kcnu1O54982 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcnu1O54982 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Kcnu1O54982 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm29741-201ENSMUST00000192667 421 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Gm43575-201ENSMUST00000196420 516 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Mir497b-201ENSMUST00000093601 125 ntBASIC14.85□□□□□ -0.03
Kcnu1O54982 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Kcnu1O54982 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Kcnu1O54982 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.84□□□□□ -0.03
Kcnu1O54982 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Kcnu1O54982 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Kcnu1O54982 Gm27533-201ENSMUST00000183800 152 ntBASIC14.84□□□□□ -0.03
Kcnu1O54982 Gm38294-201ENSMUST00000192831 381 ntBASIC14.84□□□□□ -0.03
Kcnu1O54982 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.84□□□□□ -0.03
Kcnu1O54982 Gm8396-201ENSMUST00000057361 823 ntBASIC14.84□□□□□ -0.03
Kcnu1O54982 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Kcnu1O54982 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Kcnu1O54982 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Kcnu1O54982 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Kcnu1O54982 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Kcnu1O54982 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Kcnu1O54982 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Kcnu1O54982 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Kcnu1O54982 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.83□□□□□ -0.03
Kcnu1O54982 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.83□□□□□ -0.04
Kcnu1O54982 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.83□□□□□ -0.04
Kcnu1O54982 Gm27622-201ENSMUST00000183779 60 ntBASIC14.83□□□□□ -0.04
Kcnu1O54982 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.83□□□□□ -0.04
Kcnu1O54982 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Kcnu1O54982 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Kcnu1O54982 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Kcnu1O54982 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms