Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf13O54965 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rnf13O54965 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf13O54965 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf13O54965 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rnf13O54965 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf13O54965 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf13O54965 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rnf13O54965 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.63□□□□□ -0.39
Rnf13O54965 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rnf13O54965 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.63□□□□□ -0.39
Rnf13O54965 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Rnf13O54965 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.63□□□□□ -0.39
Rnf13O54965 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf13O54965 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf13O54965 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf13O54965 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.62□□□□□ -0.39
Rnf13O54965 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf13O54965 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf13O54965 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf13O54965 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.62□□□□□ -0.39
Rnf13O54965 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Rnf13O54965 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf13O54965 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
Rnf13O54965 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf13O54965 Psmb5-202ENSMUST00000227257 622 ntBASIC12.62□□□□□ -0.39
Rnf13O54965 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf13O54965 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf13O54965 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Rnf13O54965 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf13O54965 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.61□□□□□ -0.39
Rnf13O54965 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf13O54965 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf13O54965 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf13O54965 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf13O54965 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Gm44492-201ENSMUST00000197012 141 ntBASIC12.61□□□□□ -0.39
Rnf13O54965 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf13O54965 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.61□□□□□ -0.39
Rnf13O54965 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf13O54965 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.61□□□□□ -0.39
Rnf13O54965 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.61□□□□□ -0.39
Rnf13O54965 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.61□□□□□ -0.39
Rnf13O54965 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms