Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Dkk1O54908 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC12.71□□□□□ -0.38
Dkk1O54908 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.71□□□□□ -0.38
Dkk1O54908 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Dkk1O54908 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.7□□□□□ -0.38
Dkk1O54908 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm13260-201ENSMUST00000117797 1264 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm11594-201ENSMUST00000122313 162 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm27817-201ENSMUST00000184302 233 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm43674-201ENSMUST00000196313 791 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Trdv3-201ENSMUST00000198551 309 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.7□□□□□ -0.38
Dkk1O54908 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Dkk1O54908 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Gm3213-201ENSMUST00000219296 441 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC12.7□□□□□ -0.38
Dkk1O54908 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 AC154738.2-201ENSMUST00000227403 1110 ntBASIC12.7□□□□□ -0.38
Dkk1O54908 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Dkk1O54908 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Dkk1O54908 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Dkk1O54908 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm11446-201ENSMUST00000121319 866 ntBASIC12.69□□□□□ -0.38
Dkk1O54908 Gm11025-201ENSMUST00000140773 466 ntBASIC12.69□□□□□ -0.38
Dkk1O54908 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.69□□□□□ -0.38
Dkk1O54908 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm22906-201ENSMUST00000175191 250 ntBASIC12.69□□□□□ -0.38
Dkk1O54908 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Dkk1O54908 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms