Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Matn3O35701 Gm1401-201ENSMUST00000122048 772 ntBASIC12.66□□□□□ -0.38
Matn3O35701 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Gm27525-201ENSMUST00000184465 107 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Gm37230-201ENSMUST00000194491 818 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Gm9182-201ENSMUST00000217829 639 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Matn3O35701 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.66□□□□□ -0.38
Matn3O35701 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.66□□□□□ -0.38
Matn3O35701 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Matn3O35701 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Matn3O35701 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Matn3O35701 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Matn3O35701 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.65□□□□□ -0.38
Matn3O35701 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Matn3O35701 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
Matn3O35701 Mir5131-201ENSMUST00000175426 93 ntBASIC12.65□□□□□ -0.38
Matn3O35701 Gm37935-201ENSMUST00000192012 982 ntBASIC12.65□□□□□ -0.38
Matn3O35701 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.65□□□□□ -0.38
Matn3O35701 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.65□□□□□ -0.38
Matn3O35701 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.65□□□□□ -0.38
Matn3O35701 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.65□□□□□ -0.38
Matn3O35701 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.65□□□□□ -0.38
Matn3O35701 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Matn3O35701 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Matn3O35701 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Matn3O35701 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Matn3O35701 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Matn3O35701 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.64□□□□□ -0.39
Matn3O35701 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.64□□□□□ -0.39
Matn3O35701 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.64□□□□□ -0.39
Matn3O35701 Gm37153-201ENSMUST00000193637 231 ntBASIC12.64□□□□□ -0.39
Matn3O35701 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.64□□□□□ -0.39
Matn3O35701 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Gm18246-201ENSMUST00000221023 728 ntBASIC12.64□□□□□ -0.39
Matn3O35701 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.64□□□□□ -0.39
Matn3O35701 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Matn3O35701 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Matn3O35701 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms