Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Npc1O35604 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Gm4804-201ENSMUST00000182234 999 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.62□□□□□ -0.23
Npc1O35604 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Gm20445-201ENSMUST00000061905 565 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Npc1O35604 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.62□□□□□ -0.23
Npc1O35604 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
Npc1O35604 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npc1O35604 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.62□□□□□ -0.23
Npc1O35604 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.61□□□□□ -0.23
Npc1O35604 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.61□□□□□ -0.23
Npc1O35604 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Npc1O35604 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.61□□□□□ -0.23
Npc1O35604 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.61□□□□□ -0.23
Npc1O35604 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Npc1O35604 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Npc1O35604 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Npc1O35604 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Npc1O35604 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.61□□□□□ -0.23
Npc1O35604 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npc1O35604 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.6□□□□□ -0.23
Npc1O35604 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Npc1O35604 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.6□□□□□ -0.23
Npc1O35604 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Npc1O35604 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.6□□□□□ -0.23
Npc1O35604 Gm15321-201ENSMUST00000121290 288 ntBASIC13.6□□□□□ -0.23
Npc1O35604 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.6□□□□□ -0.23
Npc1O35604 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.6□□□□□ -0.23
Npc1O35604 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.6□□□□□ -0.23
Npc1O35604 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npc1O35604 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms