Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.28□□□□□ -0.12
Ptch2O35595 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ptch2O35595 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.27□□□□□ -0.12
Ptch2O35595 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ptch2O35595 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ptch2O35595 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.27□□□□□ -0.12
Ptch2O35595 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ptch2O35595 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ptch2O35595 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.27□□□□□ -0.12
Ptch2O35595 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Gm15824-201ENSMUST00000119516 955 ntBASIC14.27□□□□□ -0.13
Ptch2O35595 Gm11425-201ENSMUST00000119608 498 ntBASIC14.27□□□□□ -0.13
Ptch2O35595 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.27□□□□□ -0.13
Ptch2O35595 Gm27892-201ENSMUST00000185017 106 ntBASIC14.27□□□□□ -0.13
Ptch2O35595 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.27□□□□□ -0.13
Ptch2O35595 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.27□□□□□ -0.13
Ptch2O35595 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Gm9396-201ENSMUST00000076703 567 ntBASIC14.27□□□□□ -0.13
Ptch2O35595 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ptch2O35595 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ptch2O35595 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.26□□□□□ -0.13
Ptch2O35595 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ptch2O35595 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 Gm15376-201ENSMUST00000122258 783 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.26□□□□□ -0.13
Ptch2O35595 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ptch2O35595 Gm43094-201ENSMUST00000196549 921 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 Gm44608-201ENSMUST00000206827 855 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ptch2O35595 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.26□□□□□ -0.13
Ptch2O35595 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.26□□□□□ -0.13
Ptch2O35595 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ptch2O35595 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ptch2O35595 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptch2O35595 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.25□□□□□ -0.13
Ptch2O35595 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.25□□□□□ -0.13
Ptch2O35595 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptch2O35595 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ptch2O35595 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.25□□□□□ -0.13
Ptch2O35595 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Ptch2O35595 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ptch2O35595 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ptch2O35595 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms