Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm22175-201ENSMUST00000175007 78 ntBASIC12.38□□□□□ -0.43
Raet1bO08603 Gm25144-201ENSMUST00000179561 110 ntBASIC12.38□□□□□ -0.43
Raet1bO08603 Gm25352-201ENSMUST00000179815 110 ntBASIC12.38□□□□□ -0.43
Raet1bO08603 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Raet1bO08603 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.38□□□□□ -0.43
Raet1bO08603 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Raet1bO08603 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Raet1bO08603 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Raet1bO08603 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Raet1bO08603 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Raet1bO08603 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1bO08603 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Raet1bO08603 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Raet1bO08603 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Gm33320-201ENSMUST00000192232 530 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.37□□□□□ -0.43
Raet1bO08603 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Raet1bO08603 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Raet1bO08603 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Raet1bO08603 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.37□□□□□ -0.43
Raet1bO08603 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.37□□□□□ -0.43
Raet1bO08603 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Raet1bO08603 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.36□□□□□ -0.43
Raet1bO08603 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.36□□□□□ -0.43
Raet1bO08603 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.36□□□□□ -0.43
Raet1bO08603 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Raet1bO08603 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Raet1bO08603 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.36□□□□□ -0.43
Raet1bO08603 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Raet1bO08603 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.36□□□□□ -0.43
Raet1bO08603 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Raet1bO08603 Gm2445-201ENSMUST00000182798 989 ntBASIC12.36□□□□□ -0.43
Raet1bO08603 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.36□□□□□ -0.43
Raet1bO08603 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Raet1bO08603 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms