Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AlyrefO08583 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AlyrefO08583 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AlyrefO08583 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.12□□□□□ -0.15
AlyrefO08583 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Mir5120-201ENSMUST00000175020 78 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm8959-201ENSMUST00000213150 571 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm10012-201ENSMUST00000078252 192 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
AlyrefO08583 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.12□□□□□ -0.15
AlyrefO08583 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AlyrefO08583 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Gm22323-201ENSMUST00000103832 109 ntBASIC14.11□□□□□ -0.15
AlyrefO08583 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.11□□□□□ -0.15
AlyrefO08583 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.11□□□□□ -0.15
AlyrefO08583 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.11□□□□□ -0.15
AlyrefO08583 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.11□□□□□ -0.15
AlyrefO08583 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AlyrefO08583 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AlyrefO08583 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AlyrefO08583 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
AlyrefO08583 Gm22018-201ENSMUST00000104357 131 ntBASIC14.1□□□□□ -0.15
AlyrefO08583 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
AlyrefO08583 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.1□□□□□ -0.15
AlyrefO08583 Gm25668-201ENSMUST00000157700 129 ntBASIC14.1□□□□□ -0.15
AlyrefO08583 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.1□□□□□ -0.15
AlyrefO08583 Gm6407-201ENSMUST00000176468 549 ntBASIC14.1□□□□□ -0.15
AlyrefO08583 Gm27438-201ENSMUST00000183480 110 ntBASIC14.1□□□□□ -0.15
AlyrefO08583 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
AlyrefO08583 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.1□□□□□ -0.15
AlyrefO08583 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AlyrefO08583 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms