Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Gm28693-202ENSMUST00000190758 331 ntBASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 AC134254.1-201ENSMUST00000221362 167 ntBASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Pcf11G3X9Z4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Gm6222-202ENSMUST00000182143 629 ntBASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Gm19309-201ENSMUST00000218295 205 ntBASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcf11G3X9Z4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pcf11G3X9Z4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Gm12846-201ENSMUST00000120431 1373 ntBASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Gm12363-201ENSMUST00000122250 668 ntBASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Olfr284-202ENSMUST00000206647 966 ntBASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Gm45880-201ENSMUST00000213041 853 ntBASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Gm43423-201ENSMUST00000198390 2094 ntBASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcf11G3X9Z4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 AC134335.2-201ENSMUST00000227660 440 ntBASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcf11G3X9Z4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms