Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim55G3X8Y1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim55G3X8Y1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim55G3X8Y1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim55G3X8Y1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim55G3X8Y1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms