Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ube4aE9Q735 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm15770-201ENSMUST00000117498 584 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm24644-201ENSMUST00000157114 139 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm38144-201ENSMUST00000192790 465 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Gm8598-201ENSMUST00000221184 836 ntBASIC16.66■□□□□ 0.26
Ube4aE9Q735 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ube4aE9Q735 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Gm11803-201ENSMUST00000119966 444 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ube4aE9Q735 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Gm37424-201ENSMUST00000191727 561 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 AC073947.2-201ENSMUST00000215888 1130 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube4aE9Q735 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.65■□□□□ 0.26
Ube4aE9Q735 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.65■□□□□ 0.26
Ube4aE9Q735 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ube4aE9Q735 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ube4aE9Q735 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Proscos-202ENSMUST00000178990 666 ntBASIC16.64■□□□□ 0.25
Ube4aE9Q735 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.64■□□□□ 0.25
Ube4aE9Q735 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ube4aE9Q735 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Gm10156-201ENSMUST00000122364 462 ntBASIC16.63■□□□□ 0.25
Ube4aE9Q735 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Gm22331-201ENSMUST00000158066 136 ntBASIC16.63■□□□□ 0.25
Ube4aE9Q735 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.63■□□□□ 0.25
Ube4aE9Q735 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Itm2b-204ENSMUST00000228637 783 ntBASIC16.63■□□□□ 0.25
Ube4aE9Q735 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ube4aE9Q735 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms