Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm6180-201ENSMUST00000065243 498 ntBASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb9E9Q5G2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb9E9Q5G2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Gm23984-201ENSMUST00000157139 203 ntBASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb9E9Q5G2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm11524-201ENSMUST00000119349 807 ntBASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm15376-201ENSMUST00000122258 783 ntBASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb9E9Q5G2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb9E9Q5G2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Gm26464-201ENSMUST00000157094 305 ntBASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Mir7654-201ENSMUST00000185082 70 ntBASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb9E9Q5G2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms