Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Gm19220-201ENSMUST00000222682 803 ntBASIC13□□□□□ -0.33
Pcdh17E9PXF0 AC154687.2-201ENSMUST00000223853 640 ntBASIC13□□□□□ -0.33
Pcdh17E9PXF0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh17E9PXF0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm21470-201ENSMUST00000187680 696 ntBASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh17E9PXF0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Mir6392-201ENSMUST00000184924 108 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh17E9PXF0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Gm11478-201ENSMUST00000117851 599 ntBASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdh17E9PXF0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms