Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm14494-201ENSMUST00000118786 435 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Mir1895-201ENSMUST00000122615 79 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm27631-201ENSMUST00000184163 466 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm27494-201ENSMUST00000184735 189 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm18206-201ENSMUST00000207027 926 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm5878E9PUB3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm5878E9PUB3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm18829-201ENSMUST00000188150 1622 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm5566-201ENSMUST00000116118 459 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm11779-201ENSMUST00000118541 368 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm22885-201ENSMUST00000157410 107 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm29741-201ENSMUST00000192667 421 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm6443-201ENSMUST00000203599 874 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Gm18027-201ENSMUST00000218947 619 ntBASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm5878E9PUB3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm5878E9PUB3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms