Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Soga1E1U8D0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm2231-201ENSMUST00000125661 612 ntBASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm12217-201ENSMUST00000118858 696 ntBASIC21.12■□□□□ 0.97
Soga1E1U8D0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm8959-201ENSMUST00000213150 571 ntBASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm5781-201ENSMUST00000219792 443 ntBASIC21.12■□□□□ 0.97
Soga1E1U8D0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Soga1E1U8D0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Gm14726-201ENSMUST00000120623 896 ntBASIC21.11■□□□□ 0.97
Soga1E1U8D0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC21.11■□□□□ 0.97
Soga1E1U8D0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Soga1E1U8D0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Gm14608-201ENSMUST00000120030 1553 ntBASIC21.1■□□□□ 0.97
Soga1E1U8D0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Gm11637-201ENSMUST00000120601 592 ntBASIC21.1■□□□□ 0.97
Soga1E1U8D0 Gm16479-201ENSMUST00000121706 932 ntBASIC21.1■□□□□ 0.97
Soga1E1U8D0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC21.1■□□□□ 0.97
Soga1E1U8D0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC21.1■□□□□ 0.97
Soga1E1U8D0 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Soga1E1U8D0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Gm10584-201ENSMUST00000207036 2628 ntBASIC21.09■□□□□ 0.97
Soga1E1U8D0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Soga1E1U8D0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms