Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hfm1D3Z4R1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Gm6015-201ENSMUST00000217493 1586 ntBASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Gm43138-201ENSMUST00000199123 708 ntBASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Gm45186-201ENSMUST00000206874 478 ntBASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hfm1D3Z4R1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hfm1D3Z4R1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Gm6447-201ENSMUST00000118905 835 ntBASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hfm1D3Z4R1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Gm19163-201ENSMUST00000223313 780 ntBASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Gm12020-201ENSMUST00000119030 2042 ntBASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hfm1D3Z4R1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms