Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp42B2RQC2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.27■□□□□ 0.19
Usp42B2RQC2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp42B2RQC2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Gm17795-201ENSMUST00000214505 757 ntBASIC16.26■□□□□ 0.19
Usp42B2RQC2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.26■□□□□ 0.19
Usp42B2RQC2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp42B2RQC2 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.26■□□□□ 0.19
Usp42B2RQC2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Gm44719-201ENSMUST00000206404 149 ntBASIC16.25■□□□□ 0.19
Usp42B2RQC2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.25■□□□□ 0.19
Usp42B2RQC2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.25■□□□□ 0.19
Usp42B2RQC2 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.25■□□□□ 0.19
Usp42B2RQC2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.25■□□□□ 0.19
Usp42B2RQC2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Usp42B2RQC2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Gm7730-201ENSMUST00000212486 454 ntBASIC16.24■□□□□ 0.19
Usp42B2RQC2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp42B2RQC2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms