Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Gm27243-201ENSMUST00000183964 521 ntBASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Scn7aB1AYL1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn7aB1AYL1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Gm45865-201ENSMUST00000211815 945 ntBASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn7aB1AYL1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Gm42627-201ENSMUST00000197347 224 ntBASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn7aB1AYL1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Gm24526-201ENSMUST00000082921 158 ntBASIC17.58■□□□□ 0.4
Scn7aB1AYL1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn7aB1AYL1 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Gm26185-201ENSMUST00000157692 266 ntBASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn7aB1AYL1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn7aB1AYL1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms