Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm10608-202ENSMUST00000213924 676 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm6082-201ENSMUST00000215204 454 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm32025-201ENSMUST00000217960 307 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a6B1AVK5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Gm5781-201ENSMUST00000219792 443 ntBASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col4a6B1AVK5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm37042-201ENSMUST00000193816 581 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Gm2231-201ENSMUST00000125661 612 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.04□□□□□ -0.16
Col4a6B1AVK5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a6B1AVK5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Gm12997-201ENSMUST00000120207 640 ntBASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col4a6B1AVK5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.02□□□□□ -0.16
Col4a6B1AVK5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms