Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.37□□□□□ -0.43
Gm11127A7VMS2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm11127A7VMS2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm13464-201ENSMUST00000119418 935 ntBASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm11127A7VMS2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm11127A7VMS2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms