Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm43758-201ENSMUST00000199500 367 ntBASIC11.76□□□□□ -0.53
Col6a4A2AX52 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.76□□□□□ -0.53
Col6a4A2AX52 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col6a4A2AX52 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm7584-201ENSMUST00000175829 940 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm4804-201ENSMUST00000182234 999 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm4857-201ENSMUST00000192718 785 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Gm37466-201ENSMUST00000195692 652 ntBASIC11.75□□□□□ -0.53
Col6a4A2AX52 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col6a4A2AX52 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.74□□□□□ -0.53
Col6a4A2AX52 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.74□□□□□ -0.53
Col6a4A2AX52 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.74□□□□□ -0.53
Col6a4A2AX52 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Gm8598-201ENSMUST00000221184 836 ntBASIC11.74□□□□□ -0.53
Col6a4A2AX52 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Acot6-202ENSMUST00000222921 3622 ntBASIC11.74□□□□□ -0.53
Col6a4A2AX52 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col6a4A2AX52 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Col6a4A2AX52 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms